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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015908728.1_cds_XP_016458909.1_52491
CDS Infomation

[gene=LOC107782543] [db_xref=GeneID:107782543] [protein=probable LRR receptor-like serine/threonine-protein kinase At1g63430] [protein_id=XP_016458909.1] [location=join(31940..32021,32254..32392,32533..32604,32686..32829,32927..33076,33362..33478,33688..33752,33931..34182,34292..34497,34581..34713,34793..34950,35094..35309,35395..35640)] [gbkey=CDS]
Sequence

ATGAGAACTTTTGCTTTTTTAACAGTTTTAGTTACTCTTGGACTGTATGTTGTGATCTGT
GATGCTTTTCCATCAAATGAAGTTTATGCTCTCAATACATTCAAGGAAGCTATATATGAA
GACCCTCTTCTGTTTTTGTCAAATTGGAATGCCTTAGATTCAGATCCTTGTGATTGGGCC
GGAATCTTTTGCTCTATGGCTCAAGATCATGTCATAAAAATTAACATTTCTGGTGCTTCA
TTGAAGGGCTTTCTTTCACCCAACTTGCATCAACTCTCTTCTTTGCAAGAACTAATACTG
CATGGAAATGTACTGATTGGTACAATACCTAAGGAGATTGGCTTGTTGAAAAACCTAAAG
GTCTTGGATTTGGGTGCTAACCAGCTAACAGGACCAATTCCTCCTGAGCTCGGCAATTTG
AAAGACATTATGAAAATAAACCTACAATCCAATGGATTAACGGGGAAATTGCCTGCTGAG
CTTGGTAATTTGAAATACCTTGAGGAACTTCGGCTGGACAGGAACAAACTTCAAGGAATA
GTGCCTGCTAATAATGGATCAGATTTTACATCTGGCGTACATGGAATGTATGCCTCTGGT
GCCAGCCCTACAGGATTTTGTCGTTCATCCCAACTTAAAGTTGCTGATTTCTCATTCAAC
TTTCTTATCGGAAGCATACCGAAGTGCTTGGGTTACCTTCCAAAATCTAGCTTTCAAGGA
AATTGCCTTCAGCATAAAGATCCAAAGCAGCGTTCTGCTTCTCTATGTGGTGGAACTCCA
CCTCCCACTAGCCATGCATCAACAGTCGATAATAAGCACCGGTCTGTTGAAGGACCAAGA
CATCAGGCTTCTTCTTCCAAGCCCACTTGGCTTTTGGCTTTAGAAGTGGTAACAGGAGTT
ATGGTAGGTTCTCTCTTCATCGTGGCTCTTGTGACTGGCCTTCACAAGTGTAAAAGCAAA
TCCTCAATCATACCTTGGAAAAAATCAGGAAGCGGGAAAGATAATATGACGATTTATGTA
GATACTGGTATGCTGAAGGATGTCGTAAGATACAGCAGACAAGAACTTGAGGTAGCTTGT
GAAGATTTCAGCAACATCATTGGATCCTCACCAGACAGCTTAGTTTACAAAGGAACAATG
AAAGGTGGACCCGAGATAGCTGTAATATCGCTTTGTGTCAAAGAAGAGCATTGGACAGCC
TATCTAGAGCTTTATTTTCAGAAAGAGGTGGCAGAATTGGCCAGAATAAATCACGAGAAT
GCTGGGAAACTTCTAGGCTATTGCAGAGAAAGTAGTCCTTTCACGAGGATGTTGGTGTTT
GAGTATGCATCCAATGGGACATTATATGAACACCTTCATTATGGAGAAGGATGCAACATA
TCTTGGACACGCCGGATGAAAATAGTTATCGGCATTGCTAAGGGACTGACATATCTACAT
TCAGAACTTGACCCTCCATTTACTATATCAGAACTGAACTCAAATTCTGTATATCTCACG
GAAGATTTTTCTCCCAAGCTTGTTGATTTTGAAAGTTGGAAGTCGATAATTTCCAGATCA
GAAAAGAATTCGGGTGCTATCAGTAGTGAAGGAGCAATTTGTGTCCTTCCAAATACTCTA
GAGAGCCGTCATCTCGATGTCCAGGGTAACACTTATGCATTTGGAGTACTGCTACTGGAA
ATAATCAGTGGGAGACCTCCATATTGCAAAGACAAAGGGTGCTTAGTAGATTGGGCTAAG
GAATTCCTTGAAGTTCCCGAGGTATTATCCTACGTTGTGGATCCAGAGTTGAAACATTTC
AAACAAGAGGATCTCAAAGTGATTTGTGAGGTGATTAACCTTTGCATCCACCCGAGTTCG
AGCAGGAGGACTTCCATGAAGGACTTGTGTGCTATGTTAGAGAGCAACATTGACACTTCA
ATCACTGCAGAGCTCAAGGCATCTTCTTTGGCGTGGGCCGAGCTTGCACTTTCATCCTAA

Peptide Sequence

PEP ID

XP_016458909.1
PEP Infomation

PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g63430 [Nicotiana tabacum]
Sequence

MRTFAFLTVLVTLGLYVVICDAFPSNEVYALNTFKEAIYEDPLLFLSNWNALDSDPCDWA
GIFCSMAQDHVIKINISGASLKGFLSPNLHQLSSLQELILHGNVLIGTIPKEIGLLKNLK
VLDLGANQLTGPIPPELGNLKDIMKINLQSNGLTGKLPAELGNLKYLEELRLDRNKLQGI
VPANNGSDFTSGVHGMYASGASPTGFCRSSQLKVADFSFNFLIGSIPKCLGYLPKSSFQG
NCLQHKDPKQRSASLCGGTPPPTSHASTVDNKHRSVEGPRHQASSSKPTWLLALEVVTGV
MVGSLFIVALVTGLHKCKSKSSIIPWKKSGSGKDNMTIYVDTGMLKDVVRYSRQELEVAC
EDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCVKEEHWTAYLELYFQKEVAELARINHEN
AGKLLGYCRESSPFTRMLVFEYASNGTLYEHLHYGEGCNISWTRRMKIVIGIAKGLTYLH
SELDPPFTISELNSNSVYLTEDFSPKLVDFESWKSIISRSEKNSGAISSEGAICVLPNTL
ESRHLDVQGNTYAFGVLLLEIISGRPPYCKDKGCLVDWAKEFLEVPEVLSYVVDPELKHF
KQEDLKVICEVINLCIHPSSSRRTSMKDLCAMLESNIDTSITAELKASSLAWAELALSS

Transcript Sequence

Gene sequence data has not been registered.